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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9995113_9997815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9995113 - 9997815

Intron Length:

2703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATAATCTGAAAA

Flanking Amino Acid:

LTVVQDDNGDNVLHLAIIHL

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.7

0.78

0.9

76.9

42.1

Minor 5ss

37.6

-1.4

50.5

Minor BPS

51.4

0.04

1.5

61.91

37.1

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014534

9962245 - 10005442

43198

ENSAPLT00000024529

9962245 - 10005442

43198