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Intron Name: Anas_platyrhynchos_platyrhynchos_4_9997931_9999993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9997931 - 9999993

Intron Length:

2063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCACTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACTTCTGTCACT

Flanking Amino Acid:

IINMRNDLYQTPLHLAVITK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

69.9

43.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.59

0.9

66.3

39.8

Minor 5ss

44.5

-0.6

3.2

65.1

46.1

Minor BPS

2.4

73.4

44.1

Associated Gene:

Gene:

NFKB1

Ensembl Gene ID:

ENSAPLG00000013878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024529

9962245 - 10005442

43198

ENSAPLT00000014534

9962245 - 10005442

43198