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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10000247_10005144_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

5UTR

Intron Coordinates:

10000247 - 10005144

Intron Length:

4898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCTTC

5'SS Class:

weak_minor

3'SS Sequence:

CTCCCTCCAACAG|C

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CTCCCTCCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.2

65.8

41.1

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

70.5

0.46

0.8

65.5

28.9

Minor 5ss

1.18

1.3

85.1

32.4

Minor BPS

46.5

-0.2

1.9

57.53

Associated Gene:

Gene:

NELL1

Ensembl Gene ID:

ENSAPLG00000008616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031196

9721390 - 10006029

284640

ENSAPLT00000042078

9721327 - 10006029

284703