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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10014058_10016185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10014058 - 10016185

Intron Length:

2128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTAACGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

CTCTCTCTAACG

Flanking Amino Acid:

MHLAPGKFIERLKLVCSPQP

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

77.3

0.68

81.5

Major PPT

0.52

65.4

40.6

Minor 5ss

38.8

-1.3

53.4

43.7

Minor BPS

58.3

0.12

1.8

63.42

44.8

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997