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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10019635_10024971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10019635 - 10024971

Intron Length:

5337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCGCTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ACCCCCCTAATT

Flanking Amino Acid:

FELVGVSYIYGLQRFCEDIE

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

72.4

0.5

0.9

64.8

36.5

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

55.1

0.24

1.7

68.43

42.6

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997