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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10025072_10025915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10025072 - 10025915

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TAATGTTTATTT

Flanking Amino Acid:

FIMGFPMITQGGMYMLQLVD

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

78.7

37.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

41.4

-1

3.2

57.2

47.1

Minor BPS

49.8

0.06

69.51

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007980

10013902 - 10043898

29997

ENSAPLT00000027662

10013596 - 10043898

30303