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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10026447_10031962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10026447 - 10031962

Intron Length:

5516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTTATT

Flanking Amino Acid:

KVNIEAVADQGPGIAFVVYP

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.79

0.9

77.1

41.8

Minor 5ss

35.6

-1.6

3.5

48.7

47.8

Minor BPS

60.2

0.4

1.6

79.65

36.5

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007980

10013902 - 10043898

29997

ENSAPLT00000027662

10013596 - 10043898

30303