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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10034678_10036833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10034678 - 10036833

Intron Length:

2156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGCTTA

5'SS Class:

major

3'SS Sequence:

CTTTCTTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTTCTTACTT

Flanking Amino Acid:

PKWEKLIDAMVWKDAATQIF

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

63.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

77.3

0.61

0.8

77.5

30.1

Minor 5ss

40.7

-1

3.3

51.6

47.5

Minor BPS

69.1

0.68

1.6

82.74

39.5

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997