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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10036969_10040216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10036969 - 10040216

Intron Length:

3248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCATATAACC

Flanking Amino Acid:

LAKGIKSSGKVVYFTATFPY

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.7

27.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.7

0.67

0.9

73.8

36.9

Minor 5ss

34.5

-1.8

40.8

39.4

Minor BPS

0.01

1.8

65.79

39.5

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997