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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10040350_10040795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10040350 - 10040795

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

TFVSGSEEYFKYFVLKISAG

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

30.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

82.3

Minor 5ss

42.3

-0.9

3.1

58.2

40.1

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997