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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10041989_10042610_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10041989 - 10042610

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CTCCCCCCAAAA

Flanking Amino Acid:

FPYLAFKNGGGAFLIPYLMM

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

65.1

41.6

Major BPS

72.5

0.56

1.2

39.9

Major PPT

56.2

0.14

56.6

26.1

Minor 5ss

43.4

-0.7

2.8

56.2

Minor BPS

44.8

-0.4

1.9

55.36

42.9

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007980

10013902 - 10043898

29997

ENSAPLT00000027662

10013596 - 10043898

30303