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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10042750_10043370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10042750 - 10043370

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

TSVLPGRVEGEDDVGDENKA

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

72.7

0.51

0.7

69.8

24.2

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

SLC6A5

Ensembl Gene ID:

ENSAPLG00000007647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027662

10013596 - 10043898

30303

ENSAPLT00000007980

10013902 - 10043898

29997