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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10065354_10074740_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10065354 - 10074740

Intron Length:
9387

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTTTA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATCAT

U12 Branch Point Sequence:
GCATAGTAAATT

Flanking Amino Acid:
LLEKPIPVEAGEALRGTITV

Intron Amino Acid Position:
421

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.1
0.95
0.8
85.8
25.5

Major BPS
80.4
0.76
1
80.3
31.8

Major PPT
96.3
1.04
0.5
92.6
17.2

Minor 5ss
49.9
-0
2.4
66.7
44.7

Minor BPS
42.4
-0.5
2.3
58.09
45

Associated Gene:

Gene:
PRMT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10065244 - 10120561
55318

10065244 - 10120531
55288