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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10075069_10086150_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10075069 - 10086150

Intron Length:
11082

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGACAT

5'SS Class:
strong_major

3'SS Sequence:
CTATTTTTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATCAT

U12 Branch Point Sequence:
TGCTCCTTCATC

Flanking Amino Acid:
LTITTSTKCTAVAGYFDIFF

Intron Amino Acid Position:
375

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.9
0.75
1
72
39.5

Major BPS
75.6
0.64
1.1
76.2
37.5

Major PPT
88.3
0.86
0.7
83.4
31.4

Minor 5ss
34.1
-1.8
3.3
49.3
46.4

Minor BPS
63.8
0.42
1.8
70.68
41.2

Associated Gene:

Gene:
PRMT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10071938 - 10117175
45238

10065244 - 10120531
55288