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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10129717_10138420_F

Intron Information:

Intron Rank:

138710

Intron Class:

major

Intron Phase:

Intron Coordinates:

10129717 - 10138420

Intron Length:

8704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTATG

5'SS Class:

major

3'SS Sequence:

TTTGGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTATTCAAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.7

44.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

81.4

0.71

0.9

78.1

40.1

Minor 5ss

37.5

-1.4

3.1

42.2

44.7

Minor BPS

48.9

-0.2

60.51

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020331

10129457 - 10142269

12813