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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10204561_10223140_R

Intron Information:

Intron Rank:

149641

Intron Class:

major

Intron Phase:

Intron Coordinates:

10204561 - 10223140

Intron Length:

18580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TATGGCTAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.5

0.73

0.7

80.9

24.4

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

45.8

-0.2

2.4

68.36

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018974

10203757 - 10223223

19467