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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10249200_10250331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10249200 - 10250331

Intron Length:

1132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCCCC

5'SS Class:

major

3'SS Sequence:

CACTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GCCTCCTCACTC

Flanking Amino Acid:

QPFIRSSYFPAASAVVPIPG

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.3

52.5

43.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

71.4

0.48

0.8

64.6

30.6

Minor 5ss

43.3

-0.7

3.2

60.3

44.3

Minor BPS

48.1

-0.1

1.8

54.76

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045604

10248219 - 10251114

2896