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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10266082_10271200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10266082 - 10271200

Intron Length:

5119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TGCACTTTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AATGCTTTAAAA

Flanking Amino Acid:

LLEAVREGLQLYGRRAPWED

Intron Amino Acid Position:

2201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

79.6

0.67

0.9

76.5

37.4

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

62.6

0.39

1.5

68.19

37.9

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744