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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10271320_10271774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10271320 - 10271774

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTGAGTTTAATA

Flanking Amino Acid:

EAHSSSDVTIGPRLFLSCPI

Intron Amino Acid Position:

2161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

84.6

0.86

41.2

Major PPT

84.6

0.78

0.7

76.5

32.1

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

56.7

0.21

1.8

67.35

39.9

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744