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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10272506_10272997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10272506 - 10272997

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTAATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

NGLLNCKYHKCPYIIGTMNQ

Intron Amino Acid Position:

2071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

73.5

0.59

81.3

29.9

Major PPT

80.5

0.69

0.9

78.1

34.4

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744