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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10278717_10279197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10278717 - 10279197

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CATCTCTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CATCTCTTCACA

Flanking Amino Acid:

SLNLTESTSLDMLLDDPGDG

Intron Amino Acid Position:

1819

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.5

29.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.63

0.8

71.8

32.3

Minor 5ss

38.8

-1.3

2.9

49.9

46.4

Minor BPS

55.5

0.17

1.8

65.38

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744