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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10282458_10284905_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10282458 - 10284905

Intron Length:

2448

Sequence Information:

Terminal Dinucleotides:

GT-TT

5'SS Sequence:

AGT|GTATTTTAA

5'SS Class:

weak_major

3'SS Sequence:

GGTCTTGTTTTTT|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATGATAT

Flanking Amino Acid:

KKKKRKNWVSQLRSSFKQAF

Intron Amino Acid Position:

1656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

58.7

36.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

23.5

-1.5

4.2

54.1

45.8

Minor 5ss

47.7

-0.2

2.5

46.6

Minor BPS

47.9

-0

2.1

71.63

44.6

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013632

10264586 - 10435226

170641