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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10285058_10285631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10285058 - 10285631

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTAATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ACCACCTCAATT

Flanking Amino Acid:

VINTPELNCKGTGAAQPTDL

Intron Amino Acid Position:

1605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

0.82

0.8

24.9

Major PPT

68.6

0.42

1.1

64.2

45.2

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

56.1

0.27

1.6

67.22

43.8

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744