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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10289868_10291526_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10289868 - 10291526

Intron Length:

1659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTATTTTATA

Flanking Amino Acid:

VSSTSSIYSTPEEKCQSEIR

Intron Amino Acid Position:

1507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

83.5

29.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.5

0.87

0.7

84.4

30.2

Minor 5ss

34.3

-1.8

2.8

43.1

43.9

Minor BPS

60.3

0.32

1.8

75.84

35.2

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744