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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10296825_10299230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10296825 - 10299230

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAATAAT

5'SS Class:

major

3'SS Sequence:

CTATTCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATTCTTTATAG

Flanking Amino Acid:

SGTRFNFSQLASPTTAAQMS

Intron Amino Acid Position:

1426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

0.9

78.2

30.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.4

0.71

0.8

76.5

31.9

Minor 5ss

31.4

-2.1

2.9

38.5

Minor BPS

58.9

0.14

1.8

65.82

41.8

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744