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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10299392_10301672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10299392 - 10301672

Intron Length:

2281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGTG

5'SS Class:

major

3'SS Sequence:

CTGTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAATTTTGAAAT

Flanking Amino Acid:

DRNTLPKKGLRYTPSTQLRS

Intron Amino Acid Position:

1372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.3

42.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

85.1

0.79

0.8

32.2

Minor 5ss

-1.2

3.6

55.1

49.2

Minor BPS

56.9

0.29

1.5

72.08

38.2

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029760

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744