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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10349401_10363822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10349401 - 10363822

Intron Length:

14422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTTACTGAATG

Flanking Amino Acid:

KNIRTDDITSGYMTDGGLGL

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

70.3

0.46

1.1

70.1

39.4

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

65.3

0.34

1.7

73.59

38.7

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744