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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10366081_10369378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10366081 - 10369378

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCCTTTCTAATG

Flanking Amino Acid:

TGQPALEDLSGEDPETRRLR

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.7

82.8

28.4

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

49.6

-0.1

1.7

54.49

41.9

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744