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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10373538_10394594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10373538 - 10394594

Intron Length:

21057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

PPTPTSSNEKEPADSTAFQP

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

NAV2

Ensembl Gene ID:

ENSAPLG00000013035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027167

10263981 - 10487724

223744

ENSAPLT00000045174

10263981 - 10487724

223744

ENSAPLT00000013632

10264586 - 10435226

170641

ENSAPLT00000039571

10263981 - 10487724

223744

ENSAPLT00000032702

10263981 - 10487724

223744

ENSAPLT00000029760

10263981 - 10487724

223744