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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10689773_10690527_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10689773 - 10690527

Intron Length:
755

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTATGTAGC

5'SS Class:
major

3'SS Sequence:
TTCCCCCTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
GATACATCATCT

Flanking Amino Acid:
APASPVKISTTGTDQNLSAY

Intron Amino Acid Position:
385

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
71.6
38.4

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
82.7
0.74
0.7
76.8
25.1

Minor 5ss
43.9
-0.7
2.5
54.2
37.2

Minor BPS
45.5
-0.2
2
65.06
44.3

Associated Gene:

Gene:
E2F8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10684506 - 10696023
11518

10684506 - 10694866
10361