Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_10710644_10712087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10710644 - 10712087

Intron Length:

1444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTTAA

5'SS Class:

major

3'SS Sequence:

ACTTCTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGTATTTTAAAA

Flanking Amino Acid:

TGDHLGLNLQQGSPKPARPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

70.4

31.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.8

0.56

0.9

68.8

36.6

Minor 5ss

36.3

-1.6

2.9

45.6

43.6

Minor BPS

57.8

0.24

1.4

64.28

35.4

Associated Gene:

Gene:

CSRP3

Ensembl Gene ID:

ENSAPLG00000008804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009182

10705775 - 10714094

8320