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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10732125_10732293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10732125 - 10732293

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATG

Flanking Amino Acid:

VHKFVIGHLKGAPASWWNHL

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.7

76.6

25.5

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

73.5

0.6

1.2

72.81

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019549

10726827 - 10739401

12575

ENSAPLT00000019192

10726725 - 10737906

11182

ENSAPLT00000008713

10726871 - 10737185

10315