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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10733442_10733997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10733442 - 10733997

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CAGGCCAGGACA

Flanking Amino Acid:

DQPSFEPSKNKKLVEDFREL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

76.7

0.6

0.8

69.7

31.1

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

43.4

-0.5

1.8

48.72

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019549

10726827 - 10739401

12575

ENSAPLT00000019192

10726725 - 10737906

11182

ENSAPLT00000008713

10726871 - 10737185

10315