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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10737186_10737653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10737186 - 10737653

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTACATATAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

69.1

0.48

32.1

Major PPT

83.3

0.75

0.7

81.6

29.6

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

0.06

1.8

68.13

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019549

10726827 - 10739401

12575