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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10783634_10785606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10783634 - 10785606

Intron Length:

1973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

CTGGGCTGAAAC

Flanking Amino Acid:

GPNRFQSQIVMKCALSGLPR

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

-0.4

51.96

45.1

Associated Gene:

Gene:

RAB3IL1

Ensembl Gene ID:

ENSAPLG00000007457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007742

10781741 - 10796495

14755

ENSAPLT00000047931

10781741 - 10797502

15762

ENSAPLT00000045159

10781741 - 10797502

15762