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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10786613_10786725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10786613 - 10786725

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

TTGTCCATCAGT

Flanking Amino Acid:

GPCLDFSKQELSELVRAAVE

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

64.7

0.37

1.2

39.8

Major PPT

78.2

0.63

0.8

76.9

31.9

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

49.5

0.04

2.3

76.55

45.9

Associated Gene:

Gene:

RAB3IL1

Ensembl Gene ID:

ENSAPLG00000007457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047931

10781741 - 10797502

15762

ENSAPLT00000045159

10781741 - 10797502

15762

ENSAPLT00000040681

10781741 - 10797502

15762

ENSAPLT00000007742

10781741 - 10796495

14755