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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10786855_10789802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10786855 - 10789802

Intron Length:

2948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

TCCTCTTGGATG

Flanking Amino Acid:

PEPVSRECKEVDSVLFTEFQ

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

76.1

0.59

70.1

40.8

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

50.5

-0.1

1.5

54.19

41.9

Associated Gene:

Gene:

RAB3IL1

Ensembl Gene ID:

ENSAPLG00000007457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045159

10781741 - 10797502

15762

ENSAPLT00000040681

10781741 - 10797502

15762