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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10788134_10789802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788134 - 10789802

Intron Length:

1669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCTCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

CTTGCCTCAAAG

Flanking Amino Acid:

PEPVSRECKESGVPAALSLL

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

67.2

0.39

66.9

33.2

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

52.7

-0

1.9

60.81

46.6

Associated Gene:

Gene:

RAB3IL1

Ensembl Gene ID:

ENSAPLG00000007457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047931

10781741 - 10797502

15762

ENSAPLT00000007742

10781741 - 10796495

14755