Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_10792513_10796213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10792513 - 10796213

Intron Length:

3701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TGGTCCCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

TAAAGTTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

73.5

38.6

Major BPS

62.7

0.32

1.2

39.8

Major PPT

73.6

0.53

0.9

65.9

36.1

Minor 5ss

46.6

-0.3

2.8

66.2

38.1

Minor BPS

51.5

0.13

1.8

69.31

41.6

Associated Gene:

Gene:

RAB3IL1

Ensembl Gene ID:

ENSAPLG00000007457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007742

10781741 - 10796495

14755