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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10809200_10809896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10809200 - 10809896

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTTTTCCACCC

Flanking Amino Acid:

FPSMEHVVRAGLMTPEEHKK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

73.8

0.59

1.3

72.8

Major PPT

77.4

0.62

0.8

70.1

35.5

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

44.1

-0.4

58.19

41.2

Associated Gene:

Gene:

BEST1

Ensembl Gene ID:

ENSAPLG00000007353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007634

10807549 - 10815890

8342