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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10811038_10812303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10811038 - 10812303

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GCACCTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

CCCTTGGCACCT

Flanking Amino Acid:

WISIPLVYTQVVTVAVYSFF

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

69.8

0.45

0.9

60.8

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

32.2

-1.2

2.5

46.07

46.3

Associated Gene:

Gene:

BEST1

Ensembl Gene ID:

ENSAPLG00000007353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007634

10807549 - 10815890

8342