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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10812457_10812920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10812457 - 10812920

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCACGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

ACGACCTTGACC

Flanking Amino Acid:

QFFFYAGWLKVAEQLINPFG

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

80.7

33.8

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

0.5

0.9

65.9

34.8

Minor 5ss

34.5

-1.8

2.8

42.4

44.3

Minor BPS

64.4

0.44

1.3

64.67

41.2

Associated Gene:

Gene:

BEST1

Ensembl Gene ID:

ENSAPLG00000007353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007634

10807549 - 10815890

8342