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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10818782_10820320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10818782 - 10820320

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCATTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GGCTTCTGAGCA

Flanking Amino Acid:

LYASYVYLSMSYYFDRDDVA

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

80.1

0.68

0.9

76.9

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

48.8

-0

1.7

57.58

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040355

10689504 - 10820818

131315

ENSAPLT00000007510

10816521 - 10820818

4298