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Intron Name: Anas_platyrhynchos_platyrhynchos_5_10868380_10868872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10868380 - 10868872

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAC

U12 Branch Point Sequence:

AACGCTGCGACT

Flanking Amino Acid:

QLLRHAKHHTDQRDYICEYC

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.2

42.1

Major BPS

49.6

-0

1.3

53.3

40.4

Major PPT

84.2

0.77

0.8

36.6

Minor 5ss

27.5

-2.6

3.6

38.1

46.8

Minor BPS

40.5

-0.6

2.1

53.68

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029552

10866463 - 10872816

6354

ENSAPLT00000007086

10867426 - 10873731

6306