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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11091868_11091922_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11091868 - 11091922

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCCCAAT

5'SS Class:

weak_major

3'SS Sequence:

CTGGCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CCTTCCTGATAT

Flanking Amino Acid:

LPLGPCAPRLGVQALLRKLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.2

56.4

44.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

69.3

0.43

0.9

58.6

38.4

Minor 5ss

40.6

-1.1

3.2

57.1

47.4

Minor BPS

51.2

0.12

1.9

69.97

46.5

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034659

11091777 - 11096591

4815