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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11092180_11092494_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11092180 - 11092494

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGAGTTG

5'SS Class:

major

3'SS Sequence:

GGAGCTCACAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

ACACCTTGGACC

Flanking Amino Acid:

GHSAARCQQECVEMLLQLEE

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.1

59.8

41.6

Major BPS

0.28

1.1

63.1

35.8

Major PPT

43.3

-0.3

1.7

38.8

39.1

Minor 5ss

32.9

-2

3.7

45.4

49.7

Minor BPS

49.1

-0

1.4

54.83

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034659

11091777 - 11096591

4815