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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11093964_11094599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11093964 - 11094599

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GTGTCCCCATGT

Flanking Amino Acid:

TLTDEQFPPEDTGPAVTPGP

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

75.1

0.57

0.9

66.2

40.8

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

41.9

-0.5

2.2

61.78

47.4

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027817

11091788 - 11098150

6363

ENSAPLT00000034659

11091777 - 11096591

4815