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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11094822_11095265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11094822 - 11095265

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGGGCA

5'SS Class:

major

3'SS Sequence:

TGTGATGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TGGCACTGAGCA

Flanking Amino Acid:

VEDITAIDVQVGQLFEEGVR

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

58.8

40.3

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

69.9

0.45

62.2

44.1

Minor 5ss

24.5

-2.9

3.4

30.4

42.9

Minor BPS

45.6

-0.3

1.8

56.23

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027817

11091788 - 11098150

6363