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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11095388_11095823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11095388 - 11095823

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCCT

5'SS Class:

major

3'SS Sequence:

TCGTTGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCGAT

U12 Branch Point Sequence:

TGTCCCCCGATT

Flanking Amino Acid:

PGRYAPSYTPSAPMDTHLLS

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

66.3

45.2

Major BPS

47.5

-0.1

1.3

43.7

39.4

Major PPT

73.5

0.53

0.9

65.2

41.2

Minor 5ss

35.9

-1.6

49.4

46.4

Minor BPS

48.4

-0

1.9

71.01

39.6

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027817

11091788 - 11098150

6363

ENSAPLT00000034659

11091777 - 11096591

4815