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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11096588_11097210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11096588 - 11097210

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGAGCT

5'SS Class:

major

3'SS Sequence:

CTCGCTGTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCAAAA

U12 Branch Point Sequence:

CTCGCTGTAACA

Flanking Amino Acid:

HSVVELICERGKILILSFW*

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

63.4

41.5

Major BPS

48.7

-0

53.2

28.8

Major PPT

66.4

0.37

60.8

39.1

Minor 5ss

31.2

-2.1

3.6

39.5

45.9

Minor BPS

49.1

-0

2.1

61.93

45.1

Associated Gene:

Gene:

VPS51

Ensembl Gene ID:

ENSAPLG00000023418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027817

11091788 - 11098150

6363